Seal element of the university of freiburg in the shape of a clover

Research

Our research focusses on plant physiological processes in plants, which let us draw conclusions about the health of the plants and, therefore, about the functioning of their ecosystems. Photosynthetic activity, chlorophyll fluorescence or the emission of volatile organic compounds (VOCs) are factors that tell us a lot about the fitness and stress condition of the plants. The most relevant two stress factors for plants, drought and heat, have intensified substantially over the last years due to the effects of the climate change. Thus, an essential part of our research is to improve our understanding how forest ecosystems will react to changing climatic conditions and what kind of measures could help to decrease the negative impact.

Research Projects

Research Project

ECODROUGHT

Effects of recurring droughts on ecohydrological feedbacks and legacy effects of important European tree species (DFG)
The impact of drought on different tree species and their recovery is determined by a complex interaction between a species’ adaptation strategy and edaphic and hydrological conditions. These ecohydrological feedbacks at the interface between soil and tree can be key factors in amplifying or mitigating the effects of drought. Our new measuring system for the continuous in situ measurement of stable water isotopes enables us to determine important underground processes, such as water uptake by roots and their influence on the water balance of trees on a daily basis. The aim is to quantify the different drought and legacy effects of the five selected tree species, particularly with regard to recurring drought. We are investigating the hypothesis that species-specific ecohydrological feedbacks at the interface between trees and soil are crucial for legacy effects during recurring droughts.

Collaborative Research Center

ECOSENSE (DFG SFB 1537)

Multi-scale quantification and modelling of spatio-temporal dynamics of ecosystem processes by smart autonomous sensor networks
Global climate change threatens ecosystem functioning worldwide. Forest ecosystems are particularly important for carbon sequestration. However, recurrent stresses, such as heat waves, floods, and droughts, increasingly endanger even central European forests, with potentially cascading effects on their carbon sink capacity, drought resilience, and sustainability. Knowledge on the impact on the multitude of processes driving soil-plant-atmosphere interactions within these complex systems is widely lacking and uncertainty about future changes extremely high.
Our interdisciplinary research project ECOSENSE will investigate all relevant scales in a next generation ecosystem research assessment. Our vision is to detect and forecast critical changes in ecosystem functioning based on the understanding of hierarchical process interaction.

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Research Project

PhytOakMeter

The role of priming for abiotic and biotic stress responses in oak
In the project, we aim to improve our mechanistic understanding of the ecophysiological responses of the oak holobiont to re-current drought stress. In addition, the effect of abiotic stress on subsequent biotic stress by above- and belowground herbivory will be elucidated. We postulate that the studied oak clone (DF159) will be primed by a first moderate drought event, hence, it will be less vulnerable for subsequent abiotic (drought) and biotic (above- and belowground herbivores) stress. This will be studied by determination of important ecophysiological parameters such as water potential, rates of photosynthesis, chlorophyll fluorescence and others. Another focus of this project is the oak typical endogenous rhythmic growth (ERG) characterized by alternating phases of root and shoot growth, and the effects of stress in these different phases.

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Research Project

Forest Floor (DFG FOR 5315)

Functioning, Dynamics, and Vulnerability in a Changing World
The forest floor (FF) forms the interface between the above-ground and below-ground parts of the forest and performs key ecosystem services such as the storage and conversion of organic matter, nutrients, water and gases. In temperate regions, even small climate changes could influence these functions by shifting the soil structure from organic to mineral layers. Our research network investigates the relationships between the controlling variables, properties and services of the forest floor. The objectives are (i) to evaluate the performance of the FF in comparison to the mineral topsoil, (ii) to assess its vulnerability to climate warming, and (iii) to use its properties as indicators for the fulfilment of ecosystem services. The focus is on the combined influence of phosphorus and temperature in European beech forests (Fagus sylvatica), mixed with spruce (Picea abies) and sycamore maple (Acer pseudoplatanus).

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Research Infrastructure

At the Chair of Ecosystem Physiology, we have an excellent research infrastructure with modern laboratories, specialised software solutions and access to extensively equipped measurement areas. Particular attention is paid to the new Ecotron facility, which was developed specifically for our research by the Environmental Technology Centre and funded by the Stihl Foundation. Two climate chambers and a greenhouse complete our extensive setup.

  • Climate chambers
  • Ecotrone
  • Greenhouse
  • Plant garden

About us

Our profile, latest news and more.

Teaching

Our course offerings and information about final theses.

Our Team

Introduction of our team members and list of contact details.

New Publications

  • Haberstroh, S.; Christen, A., Sulzer, M.; Scarpa, F.; Werner, C. (2025) Recurrent hot droughts cause persistent legacy effects in a temperate Scots Pine forest. Plant Biology, https://doi.org/10.1111/plb.70066
  • Dumberger, S.; Kinzinger, L.; Weiler, M.; Werner, C.; Haberstroh, S. (2025) Dynamic Shifts in Radial Sap Flow of Two Temperate Tree Species in Response to the Dry Summer 2022. Ecohydrology, 18:e70054. https://doi.org/10.1002/eco.70054
  • Haberstroh, S.; Scarpa, F.; Seeger, S.; Christen, A.; Werner, C. (2025) Continuous Stem Water Potential Measurements of a Diffuse-Porous Tree Species Offer New Insights Into Tree Water Relations. Ecohydrology 18, e2761. https://doi.org/10.1002/eco.2761
  • Werner, Christiane; Wallrabe, Ulrike; Christen, Andreas; Comella, Laura; Dormann, Carsten; Göritz, Anna; Grote, Rüdiger; Haberstroh, Simon; Jouda, Mazin; Kiese, Ralf; Koch, Barbara; Korvink, Jan; Kreuzwieser, Jürgen; Lang, Friederike; Müller, Julian; Prucker, Oswald; Reiterer, Alexander; Rühe, Jürgen; Rupitsch, Stefan J.; Schack-Kirchner, Helmer; Schmitt, Katrin; Stobbe, Nina; Weiler, Markus; Woias, Peter; Wöllenstein, Jürgen (2024). ECOSENSE – Multi-scale quantification and modelling of spatio-temporal dynamics of ecosystem processes by smart autonomous sensor networks. Research Ideas and Outcomes 10: e129357. https://doi.org/10.3897/rio.10.e129357
  • Meischner, Mirjam; Dumberger, Stefanie; Daber, Lars Erik; Haberstroh, Simon; Kreuzwieser, Jürgen; Schnitzler, Jörg-Peter; Werner, Christiane (2024). Jasmonic acid and heat stress induce high leaf VOCs fluxes in Picea abies aboveground but not belowground. Tree Physiology, tpae059. DOI: 10.1093/treephys/tpae059
  • Haberstroh, Simon; Kübert, Angelika; Werner, Christiane (2024). Two common pitfalls in the analysis of water stable isotopologues with cryogenic vacuum extraction and cavity ring-down spectroscopy. Analytical Science Advances, 5, e202300053. DOI: 10.1002/ansa.202300053
  • Kinzinger, L., Mach, J., Haberstroh, S., Schindler, Z., Frey, J., Dubbert, M., Seeger, S., Seifert, T., Weiler, M., Orlowski, N., Werner, C. (2024). Interaction between beech and spruce trees in temperate forest ecosystem affects water use, root water uptake pattern and canopy structure. Tree Physiology, 44, tpad144. DOI: 10.1093/treephys/tpad144