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Research

Most tree populations have a high genetic diversity, and in many tree species, there is evidence of local adaptation. At the same time, trees exhibit high phenotypic plasticity, which allows them to respond to short-term changes in environmental conditions. These mechanisms are highly relevant for trees to cope with environmental and climate change. However, it is often not known which genes and regulatory mechanisms are responsible for adaptation and plasticity. The rapid development of molecular methods and sequencing technologies in recent years now allows us to investigate the genetic and epigenetic basis of adaptation and acclimatization of tree species in unprecedented detail. In our working group, we use data from natural populations or from field or climate chamber experiments, depending on the project. We combine genomic data with phenotypic data and use bioinformatic methods and machine learning techniques to analyze these large datasets.

Insights into local adaptation and spatial patterns of (epi-)genetic diversity form the basis for adapting provenance recommendations to account for future climatic conditions.

Research Projects

Research Project

Phenology of tropical tree species

Phenology of tropical tree species – environmental cues, molecular mechanisms, and consequences for plant-animal interactions

In the project, we will investigate the causes and consequences of regular and synchronized phenological transitions in tropical tree species. Investigating tropical tree phenology requires an integrative approach that takes into account the monitoring of tree phenology, molecular methods to study gene expression, and ecological approaches to study plant-animal interactions.

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Research Project

EpiSoma

Causes and consequences of epigenetic diverstity in trees

Trees are emerging as powerful ‘model systems’ to investigate epimutational processes in plants. Given their exceptional longevity, trees act as natural (epi)mutation accumulation systems and permit unprecedented insights into the dynamics, mitotic stability, and functional impact of spontaneous epimutations over time-frames that have been inaccessible to previous prospective studies.

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Research Project

Reassembly

Reassembly of interaction networks – Resistance, resilience and functional recovery of a rainforest ecosystem

We will investigate a chronosequence (forest sites recovering for different time spans from a former use as pasture or plantation) to assess and compare the reassembly of interaction networks and trajectories of ecosystem processes. We will quantify the effects of functional traits that are predicted to be important for network reassembly and resilience to perturbations: response traits to environmental conditions, and interaction traits as determinants of network links.

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Research Infrastructure

The Chair of Forest Genetics has an excellent research infrastructure with modern molecular laboratories, a research greenhouse, and climate chambers.

The laboratory equipment includes

  • PCR und qPCR machines
  • Fragment Analyzer
  • Gel documentation
  • Pippin Prep

About us

Our profile, latest news and more

Teaching

Our course offerings and information about theses

Our Team

Introduction of our team members and list of contact details

Publications

  • Sekely J, Marchelli P, Arana V, Dauphin B, Mattera MG, Pastorino M, Scotti I, Soliani C, Heer K, Opgenoorth L (2024) Genomic Responses to Climate: Understanding local adaptation in the Andean tree species Nothofagus pumilio and implications for a changing world. Plants People Planet.
  • Estravis-Barcala M, Heer K, Marchelli P, Ziegenhagen B, Arana MV, Bellora N. (2021) Deciphering the transcriptomic regulation of heat stress responses in Nothofagus pumilio. PLoS ONE 16(3): e0246615. https://doi.org/10.1371/journal.pone.0246615
  • Estravis-Barcala M, Mattera MG, Soliani S, Bellora N, Opgenoorth L, Heer K, Arana MV (2020) Molecular bases of responses to abiotic stress in trees. Journal of Experimental Botany, 71(13), 3765–3779. https://doi.org/10.1093/jxb/erz532