Group’s Publications
Below you will find all of the group’s publications from 2020 onwards (chronologically ordered by publication date).
- Tabanera-Bravo J, Godec A. Multiple Pareto-optimal solutions of the dissipation-adaptation trade-off. Phys. Rev. Res. 7 (1), 013020(14) (2025) [pdf] [doi]
- Blom K, Thiele U, Godec A. Local order controls the onset of oscillations in the nonreciprocal Ising model. Phys. Rev. E 111 (2), 024207 (10) (2025) [pdf] [doi]
- Dieball C, Satalsari YM, Zuccolotto-Bernez AB, Egelhaaf SU, Escobedo-Sánchez MA, Godec A. Precisely controlled colloids: a playground for path-wise non-equilibrium physics. R. Soc. Chem. 21, 2170 – 2181 (2025) [pdf] [doi]
- Dieball C, Godec A. Perspective: Time irreversibility in systems observed at coarse resolution. J. Chem. Phys. 162, 090901 (2025) [pdf] [doi]
- Blom K, Makarov DE, Godec A. Hallmarks of deception in asset-exchange models. Phys. Rev. Res. 7 (1), 013279 (14) (2025) [pdf] [doi]
- Loos SAM, Godec A. Non-Markovian effects in nonequilibrium systems. J. Phys. A: Math. Theor. 58, 220301 (3) (2025) [pdf] [doi]
- Dieball C, Godec A. Thermodynamic correlation inequalities for finite times and transients. J. Phys. A: Math. Theor. 58, 255001 (2025) [pdf] [doi]
- Vossel M, de Groot BL, Godec A. Allosteric Lever: Toward a Principle of Specific Allosteric Response. Phys. Rev. X 15, 021097 (2025) [pdf] [doi]
- Zhao X, Makarov DE, Godec A. Towards Markov-State Holography. New J. Phys 27, 125022 (2025) [doi]
- Tabanera-Bravo J, Godec A. Purely quantum memory in closed systems observed via imperfect measurements. Quantum 9, 1938 (2025) [doi]
- Ibáñez M, Dieball C, Lasanta A, Godec A, Rica RA. Heating and Cooling are Fundamentally Asymmetric and Evolve Along Distinct Pathways. Nat. Phys. 20, 135–141 (2024) [pdf] [doi]
- Blom K, Song K, Vouga E, Godec A, Makarov DE. Milestoning estimators of dissipation in systems observed at a coarse resolution. PNAS 121 (17), E2318333121 (2024) [pdf] [doi]
- Miao M, Makarov DE, Blom K. Nonequilibrium statistical mechanics of money/energy exchange models. J. Phys. A: Math. Theor. 57 (15), 155003 (2024) [pdf] [doi]
- Zhao X, Hartich D, Godec A. Emergence of Memory in Equilibrium versus Nonequilibrium Systems. Phys. Rev. Lett.132, 147101 (2024) [pdf] [doi]
- Dieball C, Godec A. Thermodynamic Bounds on Generalized Transport: From Single-Molecule to Bulk Observables. Phys. Rev. Lett. 133 (6), 067101-067107 (2024) [pdf] [doi]
- Vollmar L, Bebon R, Schimpf J, Flietel B, Celiksoy S, Sönnichsen C, Godec A, Hugel T. Model-free inference of memory in conformational dynamics of a multi-domain protein. J. Phys. A: Math. Theor. 57, 365001 – 365020 (2024) [pdf] [doi]
- Hartich D, Godec A. Comment on ‘Inferring broken detailed balance in the absence of observable currents’. Nat. Commun. 15, 8678 (2024) [pdf] [doi]
- Goswami K, Cherstvy AG, Godec A, Metzler R. Anomalous diffusion of active Brownian particles in responsive elastic gels: Nonergodicity, non-Gaussianity, and distributions of trapping times. Phys. Rev. E 110, 044609 (2024) [pdf] [doi]
- Blom K, Ziethen N, Zwicker D, Godec A. Thermodynamically consistent phase-field theory including nearest-neighbor pair correlations. Phys. Rev. Res. 5, 013135 (2023) [pdf] [doi]
- Dieball C, Godec A. Direct Route to Thermodynamic Uncertainty Relations and Their Saturation. Phys. Rev. Lett.130, 087101 (2023) [pdf] [doi]
- Dieball C, Godec A. Feynman-Kac theory of time-integrated functionals: Itô versus functional calculus. J. Phys. A: Math. Theor. 56, 155002-155013 (2023) [pdf] [doi]
- Hartich D, Godec A. Violation of local detailed balance upon lumping despite a clear timescale separation. Phys. Rev. Res. 5 (3), L032017 (2023) [pdf] [doi]
- Dieball C, Wellecke G, Godec A. Asymmetric thermal relaxation in driven systems: Rotations go opposite ways.Phys. Rev. Res. 5, L042030 (2023) [pdf] [doi]
- Bebon R., Godec A. Controlling Uncertainty of Empirical First-Passage Times in the Small-Sample Regime. Phys. Rev. Lett. 131, 237101 (2023) [pdf] [doi]
- Godec A, Makarov DE. Challenges in Inferring the Directionality of Active Molecular Processes from Single-Molecule Fluorescence Resonance Energy Transfer Trajectories. J. Phys. Chem. Lett. 14, 49 – 56 (2023) [pdf] [doi]
- Zunke C, Bewerunge J, Platten F, Egelhaaf SU, Godec A. First-passage statistics of colloids on fractals: Theory and experimental realization. Sci. Adv. 8, eabk0627 (2022) [pdf] [doi]
- Dieball C, Krapf D, Weiss M, Godec A. Scattering fingerprints of two-state dynamics. New J. Phys. 24, 023004 (2022) [pdf] [doi]
- Li J, Xie JF, Godec A, Weninger KR, Liu C, Smith JC, Hong L. Non-ergodicity of a globular protein extending beyond its functional timescale. Chem. Sci. 13, 9668-9677 (2022) [pdf] [doi]
- Dieball C, Godec A. Coarse Graining Empirical Densities and Currents in Continuous-Space Steady States. Phys. Rev. Res. 4, 033243-033266 (2022) [pdf] [doi]
- Dieball C, Godec A. Mathematical, Thermodynamical, and Experimental Necessity for Coarse Graining Empirical Densities and Currents in Continuous Space. Phys. Rev. Lett. 129, 140601 (2022) [pdf] [doi]
- Dieball C, Godec A. On correlations and fluctuations of time-averaged densities and currents with general time-dependence. J. Phys. A: Math. Theor. 55, 475001-475013 (2022) [pdf] [doi]
- Lapolla A, Godec A. BetheSF: Efficient computation of the exact tagged-particle propagator in single-file systems via the Bethe eigenspectrum. Comput. Phys. Commun. 258, 107569 (2021) [pdf] [doi]
- Lapolla A, Godec A. Toolbox for quantifying memory in dynamics along reaction coordinates. Phys. Rev. Res. 3, L022018 (2021) [pdf] [doi]
- Lapolla A, Vossel M, Godec A. Time- and ensemble-average statistical mechanics of the Gaussian network model. J. Phys. A: Math. Theor. 54, 355601 (30pp) (2021) [pdf] [doi]
- Hartich D, Godec A. Thermodynamic Uncertainty Relation Bounds the Extent of Anomalous Diffusion. Phys. Rev. Lett. 127 (8), 080601 (2021) [pdf] [doi]
- Blom K, Godec A. Criticality in Cell Adhesion. Phys. Rev. X 11 (3), 031067 (35) (2021) [pdf] [doi]
- Hartich D, Godec A. Emergent Memory and Kinetic Hysteresis in Strongly Driven Networks. Phys. Rev. X 11, 041047 (2021) [pdf] [doi]
- Lapolla A, Godec A. BetheSF V2: 3-point propagator and additional external potentials. Comput. Phys. Commun.269, 108131 (2021) [pdf] [doi]
- Ukmar-Godec T, Fang P, Ibáñez de Opakua A, Henneberg F, Godec A, Pan KT, Cima-Omori MS, Chari A, Mandelkow E, Urlaub H, Zweckstetter M. Proteasomal degradation of the intrinsically disordered protein tau at single-residue resolution. Sci. Adv. 6, eaba3916, 1-12 (2020) [pdf] [suppl] [doi]
- Lapolla A, Godec A. Faster Uphill Relaxation in Thermodynamically Equidistant Temperature Quenches. Phys. Rev. Lett. 125, 110602 (2020) [pdf] [suppl] [doi]
- Lapolla A, Hartich D, Godec A. Spectral theory of fluctuations in time-average statistical mechanics of reversible and driven systems. Phys. Rev. Res. 2, 043084 (2020) [pdf] [doi]
- Lapolla A, Godec A. Single-file diffusion in a bi-stable potential: Signatures of memory in the barrier-crossing of a tagged-particle. J. Chem. Phys. 153, 194104 (2020) [pdf] [doi]